Data release versions
Get full details on data included in each UK Biobank Research Analysis Platform data release.
The Research Analysis Platform holds a copy of all UK Biobank data. All projects are created using this copy.
As UK Biobank updates the data on its end, the copy held by the Research Analysis Platform is periodically updated to reflect these upstream updates. Whenever this happens, this change will be indicated by a new data release version.
How do I select what data I’d like to dispense? This is now part of the project creation process. On the project creation screen, users will now see a new section with the different data types available to dispense. For a faster dispensal time, only select what data you’ll need.
Data release version
Tabular participant data
Bulk Data
Released on the Research Analysis Platform
v18.1
This release includes all fields from previous releases, plus these new fields:
Note: As a part of this release, the individual-level data, such as CRAM and VCF files, from the first 200k participant WGS release has been merged into the enduring 500k release fields.
November 30 2023
v17.1
This release includes all fields from previous releases, plus these new fields:
November 30 2023
v16.1
This release includes all fields from previous releases, plus these new fields:
Note: As part of this release, data were added covering additional participants to the following fields:
August 2 2023
v15.1
April 12 2023
v14.1
v13.1
December 7 2022
v12.1
This release includes all fields from previous releases.
June 29 2022
v11.1
May 25 2022
v10.1
April 14 2022
v9.1
Same as v6.1
This release includes the all fields from previous releases, plus these new fields:
Feb 9 2022
v8.1
Same as v6.1
This release includes all fields from previous releases, with these updates:
Nov 15 2021
v7.1
Same as v6.1
This release includes all fields from previous releases, plus these additional fields:
Note: Starting from this release, FAM files for field 23145 and SAMPLE files for field 23147 contain gender info.
Note: As part of this release, for fields 23141, 23142, 23143, and 23144, data were added for an additional 150k participants, and data were updated for 44 existing participants.
Oct 29 2021
v6.1
All fields from previous releases
Sept 22 2021
v5.0
Same as v4.0
This release includes all fields from previous releases, plus these additional fields:
Sept 3 2021
v4.0
This release includes all fields from previous releases, plus these additional fields:
July 27 2021
v3.0
This release includes all fields from v1.0 and v2.0, plus these additional fields, for participants for which there were data, as of March 2021:
June 4 2021
v2.0
This release includes all fields from v1.0, as well as these additional fields:
Jan 28 2021
v1.0
This release includes only the following fields:
Nov 19 2020
About Showcase Releases
Each Showcase release includes both newly released data, and all Showcase data included in previous releases. So the June 2021 Showcase release, for example, includes all data released in all previous Showcase releases, as detailed on the UK Biobank website.
Bulk Fields in the Latest Release
The following table lists all the bulk fields, along with their folders and suffixes, as of the releases (v17.1, v18.1).
This list follows the same order as that in which the subfolders will appear, in projects on the Platform.
Field ID
Data Type
Subfolder
Suffixes
Acceleration intensity time-series
/Bulk/Activity/Epoch/
.csv
Acceleration data - cwa format
/Bulk/Activity/Raw/
.cwa
Arterial spin labelling brain images - DICOM
/Bulk/Brain MRI/ASL/
.zip
Multiband diffusion brain images - DICOM
/Bulk/Brain MRI/dMRI/
.zip
Multiband diffusion brain images - NIFTI
/Bulk/Brain MRI/dMRI/
.zip
Functional brain images - resting - DICOM
/Bulk/Brain MRI/rfMRI/
.zip
Functional brain images - resting - NIFTI
/Bulk/Brain MRI/rfMRI/
.zip
rfMRI full correlation matrix, dimension 25
/Bulk/Brain MRI/rfMRI/
.txt
rfMRI full correlation matrix, dimension 100
/Bulk/Brain MRI/rfMRI/
.txt
rfMRI partial correlation matrix, dimension 25
/Bulk/Brain MRI/rfMRI/
.txt
rfMRI partial correlation matrix, dimension 100
/Bulk/Brain MRI/rfMRI/
.txt
rfMRI component amplitudes, dimension 25
/Bulk/Brain MRI/rfMRI/
.txt
rfMRI component amplitudes, dimension 100
/Bulk/Brain MRI/rfMRI/
.txt
Scout images for brain scans - DICOM
/Bulk/Brain MRI/Scout/
.zip
Phoenix - DICOM
/Bulk/Brain MRI/Scout/
.zip
Susceptibility weighted brain images - DICOM
/Bulk/Brain MRI/SWI/
.zip
Susceptibility weighted brain images - NIFTI
/Bulk/Brain MRI/SWI/
.zip
T1 structural brain images - DICOM
/Bulk/Brain MRI/T1/
.zip
T1 structural brain images - NIFTI
/Bulk/Brain MRI/T1/
.zip
T1 surface model files and additional structural segmentations
/Bulk/Brain MRI/T1/
.zip
T2 FLAIR structural brain images - DICOM
/Bulk/Brain MRI/T2 FLAIR/
.zip
T2/PD brain images - DICOM
/Bulk/Brain MRI/T2 FLAIR/
.zip
T2 FLAIR structural brain images - NIFTI
/Bulk/Brain MRI/T2 FLAIR/
.zip
Functional brain images - task - DICOM
/Bulk/Brain MRI/tfMRI/
.zip
Functional brain images - task - NIFTI
/Bulk/Brain MRI/tfMRI/
.zip
Eprime advisor file
/Bulk/Brain MRI/tfMRI/
.adv
Eprime txt file
/Bulk/Brain MRI/tfMRI/
.txt
Eprime ed2 file
/Bulk/Brain MRI/tfMRI/
.ed2
Cardiac monitoring phase 1 - Acceleration
/Bulk/Cardiac monitoring phase 1/Acceleration/
.zacl
Cardiac monitoring phase 1 - ECG trace
/Bulk/Cardiac monitoring phase 1/ECG trace/
.zip
Cardiac monitoring phase 1 - Impedance
/Bulk/Cardiac monitoring phase 1/Impedance/
.zimp
Cardiac monitoring phase 2 - Episodic data for specific arrhythmia
/Bulk/Cardiac monitoring phase 2/Episodic data for specific arrhythmia (result file xml)/
.xml
Cardiac monitoring phase 2 - Hourly summary and QT
/Bulk/Cardiac monitoring phase 2/Hourly summary and QT (result file xml)/'
.report
Cardiac monitoring phase 2 - Human-readable analysis report
/Bulk/Cardiac monitoring phase 2/Human-readable analysis report (result file pdf)/
Cardiac monitoring phase 2 - Raw ECG data from monitor
/Bulk/Cardiac monitoring phase 2/Raw ECG data from monitor (result file edf)/
.edf
Cardiac monitoring phase 2 - Summary analysis data
/Bulk/Cardiac monitoring phase 2/Summary analysis data (result file csv)/
.csv
Carotid artery ultrasound image (left)
/Bulk/Carotid Ultrasound/Carotid artery (left)/
.zip
Carotid artery ultrasound image (right)
/Bulk/Carotid Ultrasound/Carotid artery (right)/
.zip
Raw carotid device data
/Bulk/Carotid Ultrasound/Raw data/
.zip
Carotid artery ultrasound report
/Bulk/Carotid Ultrasound/Report/
.zip
Whole genome CRAM files (DRAGEN) [200k]
/Bulk/DRAGEN WGS/Whole genome CRAM files (DRAGEN) [200k]/
dragen.cram
Whole genome CRAM indices (DRAGEN) [200k]
WGS/Whole genome CRAM indices (DRAGEN) [200k]/
dragen.cram.crai
Whole genome supplementary files (DRAGEN) [200k]
/Bulk/DRAGEN WGS/Whole genome supplementary files (DRAGEN) [200k]/
dragen.sample-level-supplementary.zip
Whole genome variant call files (GVCFs) (DRAGEN) [200k]
/Bulk/DRAGEN WGS/Whole genome variant call files (GVCFs) (DRAGEN) [200k]/
dragen.hard-filtered.gvcf.gz
Whole genome variant call files (GVCFs) (DRAGEN) [200k]
/Bulk/DRAGEN WGS/Whole genome variant call files (GVCFs) (DRAGEN) [200k]/
dragen.hard-filtered.gvcf.gz.tbi
Whole genome variant call files (GVCFs) (DRAGEN) [200k]
/Bulk/DRAGEN WGS/Whole genome variant call files (GVCFs) (DRAGEN) [200k]/
dragen.hard-filtered.vcf.gz
Whole genome variant call files (VCFs) (DRAGEN) [200k]
/Bulk/DRAGEN WGS/Whole genome variant call files (VCFs) (DRAGEN) [200k]/
dragen.hard-filtered.vcf.gz.tbi
Whole genome diagnostics files (DRAGEN) [200k]
/Bulk/DRAGEN WGS/Whole genome diagnostics files (DRAGEN) [200k]/
dragen.diagnostics.zip
Whole genome CNV call files (DRAGEN) [200k]
/Bulk/DRAGEN WGS/Whole genome CNV call files (DRAGEN) [200k]/
dragen.cnv.vcf.gz
Whole genome CNV call files (DRAGEN) [200k]
/Bulk/DRAGEN WGS/Whole genome CNV call files (DRAGEN) [200k]/
dragen.cnv.vcf.gz.tbi
Whole genome CNV supplementary files (DRAGEN) [200k]
/Bulk/DRAGEN WGS/Whole genome CNV supplementary files (DRAGEN) [200k]/
dragen.cnv-supplementary.zip
Whole genome SV call files (DRAGEN) [200k]
/Bulk/DRAGEN WGS/Whole genome SV call files (DRAGEN) [200k]/
dragen.sv.vcf.gz
Whole genome SV call files (DRAGEN) [200k]
/Bulk/DRAGEN WGS/Whole genome SV call files (DRAGEN) [200k]/
dragen.sv.vcf.gz.tbi
Whole genome SV supplementary files (DRAGEN) [200k]
/Bulk/DRAGEN WGS/Whole genome SV supplementary files (DRAGEN) [200k]/
dragen.sv-supplementary.zip
Whole genome STR call files (DRAGEN) [200k]
/Bulk/DRAGEN WGS/Whole genome STR call files (DRAGEN) [200k]/
dragen.repeats.vcf.gz
Whole genome STR call files (DRAGEN) [200k]
/Bulk/DRAGEN WGS/Whole genome STR call files (DRAGEN) [200k]/
dragen.repeats.vcf.gz.tbi
Whole genome STR supplementary files (DRAGEN) [200k]
/Bulk/DRAGEN WGS/Whole genome STR supplementary files (DRAGEN) [200k]/
dragen.str-supplementary.zip
Whole genome CYP2D6 genotype calls (DRAGEN) [200k]
/Bulk/DRAGEN WGS/Whole genome CYP2D6 genotype calls (DRAGEN) [200k]/
dragen.cyp2d6.tsv
Fitness test results, including ECG data
/Bulk/Electrocardiogram/Fitness/
.xml
ECG datasets
/Bulk/Electrocardiogram/Resting/
.xml
Exome OQFE CRAM files
/Bulk/Exome sequences/Exome OQFE CRAM files/
.cram
Exome OQFE CRAM indices
/Bulk/Exome sequences/Exome OQFE CRAM files/
.cram.crai
Exome sequences
/Bulk/Exome sequences_Alternative exome processing/Exome variant call files (DRAGEN) (VCFs)/
.vcf.gz
Exome sequences
/Bulk/Exome sequences_Alternative exome processing/Exome variant call files (DRAGEN) (VCFs)/
vcf.gz.tbi
Exome sequences
/Bulk/Exome sequences_Alternative exome processing/Exome variant call files (gnomAD) (VCFs)/
.ukb24068_c10_b0_v1.vcf.gz, ukb24068_c10_b1_v1.vcf.gz...
Exome sequences
/Bulk/Exome sequences_Alternative exome processing/Exome variant call files (gnomAD) (VCFs)/helper_files/
.Broad_455k_exome_gnomAD_QC_summary.md
Exome sequences
/Bulk/Exome sequences_Alternative exome processing/Exome variant call files (gnomAD) (VCFs)/
.ukb24068_c10_b0_v1.vcf.gz.tbi,ukb24068_c10_b1_v1.vcf.gz.tbi
Exome OQFE CRAM files
/Bulk/Exome sequences_Previous exome releases/Exome OQFE CRAM files - interim 200k release/
.cram
Exome OQFE CRAM indices
/Bulk/Exome sequences_Previous exome releases/Exome OQFE CRAM files - interim 200k release/
.cram.crai
Exome OQFE variant call files (VCFs)
/Bulk/Exome sequences/Exome OQFE variant call files (VCFs)/
.g.vcf.gz
Exome OQFE variant call file (VCF) indices
/Bulk/Exome sequences/Exome OQFE variant call files (VCFs)/
.g.vcf.gz.tbi
Exome OQFE variant call files (VCFs)
/Bulk/Exome sequences_Previous exome releases/Exome OQFE variant call files (VCFs) - interim 200k release/
.g.vcf.gz
Exome OQFE variant call file (VCF) indices
/Bulk/Exome sequences_Previous exome releases/Exome OQFE variant call files (VCFs) - interim 200k release/
.g.vcf.gz.tbi
Population level exome OQFE variants, BGEN format - interim 300k release
/Bulk/Exome sequences_Previous exome releases/Population level exome OQFE variants, BGEN format - interim 300k release/
.bgen, .bgi, .sample
Population level exome OQFE variants, BGEN format - interim 450k release
/Bulk/Exome sequences/Population level exome OQFE variants, BGEN format - interim 450k release/
.bgen,
.bgi,
.sample
Population level exome OQFE variants, BGEN format - 500k release
/Bulk/Exome sequences/Population level exome OQFE variants, BGEN format - 500k release/
ukb23159_c1_b0_v1.bgen, ukb23159_c1_b0_v1.bgen.bgi, ukb23159_c1_b0_v1.sample
Population level exome OQFE variants, PLINK format
/Bulk/Exome sequences_Previous exome releases/Population level exome OQFE variants, PLINK format - interim 200k release/
.bed, .bim, .fam
Population level exome OQFE variants, PLINK format - interim 300k release
/Bulk/Exome sequences_Previous exome releases/Population level exome OQFE variants, PLINK format - interim 300k release/
.bed, .bim, .fam, .masks, .txt, .txt.gz
Population level exome OQFE variants, PLINK format - interim 450k release
/Bulk/Exome sequences/Population level exome OQFE variants, PLINK format - interim 450k release/
.bed, .bim, .fam, .masks, .txt, .txt.gz
Population level exome OQFE variants, PLINK format - 500k release
/Bulk/Exome sequences/Population level exome OQFE variants, PLINK format - 500k release/
ukb23158_c1_b0_v1.bed, ukb23158_c1_b0_v1.bim, ukb23158_c1_b0_v1.fam, ...
Population level exome OQFE variants, PLINK format - 500k release helper files
/Bulk/Exome sequences/Population level exome OQFE variants, PLINK format - 500k release/helper_files/
ukb23158_500k_OQFE.sets.txt.gz, ukb23158_500k_OQFE.masks, ukb23158_500k_OQFE.annotations.txt.gz, ukb23158_500k_OQFE.90pct10dp_qc_variants.txt, ukb23158_500k_OQFE.variant_ID_mappings.txt
Population level exome OQFE variants, pVCF format - 500k release
el exome OQFE variants, pVCF format - 500k release/
ukb23158_500k_OQFE.sets.txt.gz, ukb23158_500k_OQFE.masks, ukb23158_500k_OQFE.annotations.txt.gz, ukb23158_500k_OQFE.90pct10dp_qc_variants.txt, ukb23158_500k_OQFE.variant_ID_mappings.txt
Population level exome OQFE variants, pVCF format
/Bulk/Previous exome releases/Population level exome OQFE variants, pVCF format - interim 200k release/
.vcf.gz, .vcf.gz.tbi
Population level exome OQFE variants, pVCF format - interim 300k release
/Bulk/Exome sequences_Previous exome releases/Population level exome OQFE variants, pVCF format - interim 300k release/
.vcf.gz, .vcf.gz.tbi
Population level exome OQFE variants, pVCF format - interim 450k release
/Bulk/Exome sequences/Population level exome OQFE variants, pVCF format - interim 450k release/
.vcf.gz, .vcf.gz.tbi
CEL files
/Bulk/Genotype Results/Genotype CEL files/
.cel
Genotype calls
/Bulk/Genotype Results/Genotype calls/
.bed, .bim, .dat, .fam, .txt
Genotype calls
/Bulk/Genotype Results/Genotype calls/posteriors/
.batch, .bim, .bin
Genotype confidences
/Bulk/Genotype Results/Genotype confidences/
.txt
Genotype copy number variants, log2ratios
/Bulk/Genotype Results/Genotype copy number variants, log2ratios
.txt
Genotype copy number variants B-allele frequencies
/Bulk/Genotype Results/Genotype copy number variants B-allele frequencies/
.txt
Genotype intensities
/Bulk/Genotype Results/Genotype intensities/
.bin
Aortic distensibilty images - DICOM
/Bulk/Heart MRI/Aortic distensibility/
.zip
Blood flow images - DICOM
/Bulk/Heart MRI/Blood flow/
.zip
Cine tagging images - DICOM
/Bulk/Heart MRI/CINE tagging/
.zip
Left ventricular outflow tract images - DICOM
/Bulk/Heart MRI/Left ventricular outflow tract/
.zip
Long axis heart images - DICOM
/Bulk/Heart MRI/Long axis/
.zip
Scout images for heart MRI - DICOM
/Bulk/Heart MRI/Scout/
.zip
Experimental shMOLLI sequence images - DICOM
/Bulk/Heart MRI/ShMOLLI/
.zip
Short axis heart images - DICOM
/Bulk/Heart MRI/Short axis/
.zip
Haplotypes (WTCHG)
/Bulk/Imputation/Haplotypes/
.bgen, .bgi
21008
Imputation from genotype (GEL)
/Bulk/Imputation/Imputation from genotype (GEL)/
ukb21008_c1_b0_v1.bgen, ukb21008_c1_b0_v1.bgen.bgi, 'ukb21008_c1_b0_v1.sample', ...
21008
Imputation from genotype (GEL) helper files
/Bulk/Imputation/Imputation from genotype (GEL)/helper_files/
caution_sites.tsv.gz, ukb21008_c1_b0_v1.bgen.pos, ...
21007
Imputation from genotype (TOPmed)
/Bulk/Imputation/Imputation from genotype (TOPmed)/
ukb21007_c1_b0_v1.bgen, ukb21007_c1_b0_v1.bgen.bgi, ukb21007_c1_b0_v1.sample, ...
21007
Imputation from genotype (TOPmed) helper files
/Bulk/Imputation/Imputation from genotype (TOPmed)/helper_files
ukb21007_c1_b0_v1.sites.vcf.gz, ukb21007_c1_b0_v1.sites.vcf.gz.csi, ...
Imputation from genotype (WTCHG)
/Bulk/Imputation/UKB imputation from genotype/
.bgen, .bgi, .sample, .txt
Kidney Imaging - gradient echo - DICOM
/Bulk/Kidney MRI/Gradient echo/
.zip
Kidney Imaging - T1 ShMOLLI - DICOM
/Bulk/Kidney MRI/ShMOLLI/
.zip
Kidney Imaging - T2 haste - DICOM
/Bulk/Kidney MRI/T2 HASTE/
.zip
Kidney imaging - T2 Vibe - DICOM
/Bulk/Kidney MRI/T2 VIBE/
.zip
Liver images - gradient echo - DICOM
/Bulk/Liver MRI/Gradient echo/
.zip
Liver images - IDEAL protocol - DICOM
/Bulk/Liver MRI/IDEAL/
.zip
Liver Imaging - T1 ShMoLLI - DICOM
/Bulk/Liver MRI/ShMOLLI/
.zip
Pancreas Images - gradient echo - DICOM
/Bulk/Pancreas MRI/Gradient echo/
.zip
Pancreatic fat - DICOM
/Bulk/Pancreas MRI/Pancreatic fat/
.zip
Measurements of pancreas volume - DICOM
/Bulk/Pancreas MRI/Pancreatic volume/
.zip
Pancreas Images - ShMoLLI - DICOM
/Bulk/Pancreas MRI/ShMOLLI/
.zip
Protein biomarkers - Olink helper files
/Bulk/Protein biomarkers/Olink/helper_files/
.pdf, .dat
FDA data file (left)
/Bulk/Retinal Optical Coherence Tomography/FDA (left)/
.fda
FDA data file (right)
/Bulk/Retinal Optical Coherence Tomography/FDA (right)/
.fda
FDS data file (left)
/Bulk/Retinal Optical Coherence Tomography/FDS (left)/
.fds
FDS data file (right)
/Bulk/Retinal Optical Coherence Tomography/FDS (right)/
.fds
Fundus retinal eye image (left)
/Bulk/Retinal Optical Coherence Tomography/Fundus (left)/
.png
Fundus retinal eye image (right)
/Bulk/Retinal Optical Coherence Tomography/Fundus (right)/
.png
OCT image slices (left)
/Bulk/Retinal Optical Coherence Tomography/Slices (left)/
.zip
OCT image slices (right)
/Bulk/Retinal Optical Coherence Tomography/Slices (right)/
.zip
DXA images
/Bulk/Whole Body DXA/DXA/
.zip
Dixon technique for internal fat - DICOM
/Bulk/Whole Body MRI/Dixon/
.zip
BGI WGS CRAM files
/Bulk/Whole genome sequences/BGI WGS CRAM files/
.cram
BGI WGS CRAM indices
/Bulk/Whole genome sequences/BGI WGS CRAM files/
.cram.crai
BQSR - GATK BaseRecalibrator
/Bulk/Whole genome sequences/BQSR - GATK BaseRecalibrator/
.recal_table
Broad WGS CRAM files
/Bulk/Whole genome sequences/Broad WGS CRAM files/
.cram
Broad WGS CRAM indices
/Bulk/Whole genome sequences/Broad WGS CRAM files/
.cram.crai
Concatenated QC Metrics
/Bulk/Whole genome sequences/Concatenated QC Metrics/
.qaqc_metrics
Genotype Concordance - Contingency Metrics
/Bulk/Whole genome sequences/Genotype Concordance - Contingency Metrics/
.genotype_concordance_contingency_metrics
23319
Genotype Concordance - Detail Metrics
/Bulk/Whole genome sequences/Genotype Concordance - Detail Metrics/
.genotype_concordance_detail_metrics
Genotype Concordance - Summary Metrics (Picard)/
/Bulk/Whole genome sequences/Genotype Concordance - Summary Metrics (Picard)/
.genotype_concordance_summary_metrics
Genotype Concordance
/Bulk/Whole genome sequences/Genotype Concordance/
.nrd.stats
Manta-called scored structural variant and indel candidates
/Bulk/Whole genome sequences/Manta-called scored structural variant and indel candidates/
.diploidSV.vcf.gz, .diploidSV.vcf.gz.tbi
Manta-called unscored structural variant and indel candidates
/Bulk/Whole genome sequences/Manta-called unscored structural variant and indel candidates/
.candidateSV.vcf.gz, .candidateSV.vcf.gz.tbi
Microsatellite data generated using a specially optimized tool (popSTR) for microsatellite (STR) marker calling in whole-genome sequencing studies.
/Bulk/Whole genome sequences/Microsatellites - 150k release/
ukb23365_c10_b0_v1.vcf.gz.tbi,
ukb23365_c10_b1_v1.vcf.gz.tbi, ukb23365_c10_b2_v1.vcf.gz.tbi, ukb23365_c9_b2406_v1.vcf.gz.tbi, ukb23365_c9_b2407_v1.vcf.gz.tbi, ukb23365_c9_b2408_v1.vcf.gz.tbi
Population level genome variants, BGEN format - interim 200k release
/Bulk/Whole genome sequences/Population level genome variants, BGEN format - interim 200k release/
ukb24306_c10_b0_v1.bgen, ukb24306_c11_b0_v1.bgen 'ukb24306_c12_b0_v1.bgen, ukb24306_c13_b0_v1.bgen, ukb24306_c14_b0_v1.bgen, ukb24306_c15_b0_v1.bgen, ukb24306_c16_b0_v1.bgen, ukb24306_c17_b0_v1.bgen, ukb24306_c18_b0_v1.bgen, ukb24306_c19_b0_v1.bgen, ukb24306_c1_b0_v1.bgen, ukb24306_c20_b0_v1.bgen, ukb24306_c21_b0_v1.bgen, ukb24306_c22_b0_v1.bgen, ukb24306_c2_b0_v1.bgen, ukb24306_c3_b0_v1.bgen, ukb24306_c4_b0_v1.bgen, ukb24306_c5_b0_v1.bgen, ukb24306_c6_b0_v1.bgen, ukb24306_c7_b0_v1.bgen, ukb24306_c8_b0_v1.bgen, ukb24306_c9_b0_v1.bgen, ukb24306_cX_b0_v1.bgen, ukb24306_c10_b0_v1.sample, ukb24306_c11_b0_v1.sample, ukb24306_c12_b0_v1.sample, ukb24306_c13_b0_v1.sample, ukb24306_c14_b0_v1.sample, ukb24306_c15_b0_v1.sample, ukb24306_c16_b0_v1.sample, ukb24306_c17_b0_v1.sample, ukb24306_c18_b0_v1.sample, ukb24306_c19_b0_v1.sample, ukb24306_c1_b0_v1.sample, ukb24306_c20_b0_v1.sample, ukb24306_c21_b0_v1.sample, ukb24306_c22_b0_v1.sample, ukb24306_c2_b0_v1.sample, ukb24306_c3_b0_v1.sample, ukb24306_c4_b0_v1.sample, ukb24306_c5_b0_v1.sample, ukb24306_c6_b0_v1.sample, ukb24306_c7_b0_v1.sample, ukb24306_c8_b0_v1.sample, ukb24306_c9_b0_v1.sample, ukb24306_cX_b0_v1.sample
Population level WGS variants, PLINK format - interim 200k release
/Bulk/Whole genome sequences/Population level WGS variants, PLINK format - interim 200k release/
ukb24305_c10_b0_v1.bed, ukb24305_c11_b0_v1.bed, ukb24305_c12_b0_v1.bed, ukb24305_c13_b0_v1.bed, ukb24305_c14_b0_v1.bed, ukb24305_c15_b0_v1.bed, ukb24305_c16_b0_v1.bed, ukb24305_c17_b0_v1.bed, ukb24305_c18_b0_v1.bed, ukb24305_c19_b0_v1.bed, ukb24305_c1_b0_v1.bed, ukb24305_c20_b0_v1.bed, ukb24305_c21_b0_v1.bed, ukb24305_c22_b0_v1.bed, ukb24305_c2_b0_v1.bed, ukb24305_c3_b0_v1.bed, ukb24305_c4_b0_v1.bed, ukb24305_c5_b0_v1.bed, ukb24305_c6_b0_v1.bed, ukb24305_c7_b0_v1.bed, ukb24305_c8_b0_v1.bed, ukb24305_c9_b0_v1.bed, ukb24305_cX_b0_v1.bed, ukb24305_c10_b0_v1.bim, ukb24305_c11_b0_v1.bim, ukb24305_c12_b0_v1.bim, ukb24305_c13_b0_v1.bim, ukb24305_c14_b0_v1.bim, ukb24305_c15_b0_v1.bim, ukb24305_c16_b0_v1.bim, ukb24305_c17_b0_v1.bim, ukb24305_c18_b0_v1.bim, ukb24305_c19_b0_v1.bim, ukb24305_c1_b0_v1.bim, ukb24305_c20_b0_v1.bim, ukb24305_c21_b0_v1.bim, ukb24305_c22_b0_v1.bim, ukb24305_c2_b0_v1.bim, ukb24305_c3_b0_v1.bim, ukb24305_c4_b0_v1.bim, ukb24305_c5_b0_v1.bim, ukb24305_c6_b0_v1.bim, ukb24305_c7_b0_v1.bim, ukb24305_c8_b0_v1.bim, ukb24305_c9_b0_v1.bim, ukb24305_cX_b0_v1.bim, ukb24305_c10_b0_v1.fam, ukb24305_c11_b0_v1.fam, ukb24305_c12_b0_v1.fam, ukb24305_c13_b0_v1.fam, ukb24305_c14_b0_v1.fam, ukb24305_c15_b0_v1.fam, ukb24305_c16_b0_v1.fam, ukb24305_c17_b0_v1.fam, ukb24305_c18_b0_v1.fam, ukb24305_c19_b0_v1.fam, ukb24305_c1_b0_v1.fam, ukb24305_c20_b0_v1.fam, ukb24305_c21_b0_v1.fam, ukb24305_c22_b0_v1.fam, ukb24305_c2_b0_v1.fam, ukb24305_c3_b0_v1.fam, ukb24305_c4_b0_v1.fam, ukb24305_c5_b0_v1.fam, ukb24305_c6_b0_v1.fam, ukb24305_c7_b0_v1.fam, ukb24305_c8_b0_v1.fam, ukb24305_c9_b0_v1.fam, ukb24305_cX_b0_v1.fam
Population level WGS variants, pVCF format - interim 200k release
/Bulk/Whole genome sequences/Population level WGS variants, pVCF format - interim 200k release/
ukb24304_c10_b0_v1.vcf.gz.tbi, ukb24304_c10_b1_v1.vcf.gz.tbi, ukb24304_c10_b2_v1.vcf.gz.tbi, ukb24304_cX_b3118_v1.vcf.gz.tbi, ukb24304_cX_b3119_v1.vcf.gz.tbi, ukb24304_cX_b3120_v1.vcf.gz.tbi
Population level WGS variants, pVCF format - 500k release
/Bulk/Whole genome sequences/Population level WGS variants, pVCF format - 500k release/
ukb23374_c10_b0_v1.vcf.gz.tbi, ukb23374_c10_b1_v1.vcf.gz.tbi, ukb23374_c10_b2_v1.vcf.gz.tbi, ukb23374_cX_b7800_v1.vcf.gz.tbi, ukb23374_cX_b7801_v1.vcf.gz.tbi, ukb23374_cX_b7802_v1.vcf.gz.tbi
Sample Contamination (ReadHaps)
/Bulk/Whole genome sequences/Sample Contamination (ReadHaps)/
.contamination
Sample Contamination (verifyBamID) - depthSM
/Bulk/Whole genome sequences/Sample Contamination (verifyBamID) - depthSM/
.verifyBamID.depthSM
Sample Contamination (verifyBamID) - selfSM
/Bulk/Whole genome sequences/Sample Contamination (verifyBamID) - selfSM/
.verifyBamID.selfSM
Whole genome CRAM files
/Bulk/Whole genome sequences/Whole genome CRAM files/
.cram
Whole genome CRAM files (reserved)
/Bulk/Whole genome sequences/Whole genome CRAM files (reserved)/
.cram
Whole genome CRAM indices (reserved)
/Bulk/Whole genome sequences/Whole genome CRAM files (reserved)/
.cram.crai
Whole genome CRAM indices
/Bulk/Whole genome sequences/Whole genome CRAM files/
.cram.crai
Whole genome GATK joint call pVCF
/Bulk/Whole genome sequences/Whole genome GATK joint call pVCF/
.vcf.gz, .vcf.gz.tbi, qc_metrics_gatk_variant_qc.tab.gz, qc_metrics_gatk_variant_qc.tab.gz.tbi, qc_metrics_GATK_version.txt, qc_metrics_README.pdf
Whole genome GraphTyper joint call pVCF (deprecated)
/Bulk/Whole genome sequences/Whole genome GraphTyper joint call pVCF (deprecated)/
.vcf.gz, .vcf.gz.tbi,
qc_metrics_graphtyper_variant_qc.tab.gz,
qc_metrics_graphtyper_variant_qc.tab.gz.tbi,
qc_metrics_README.pdf
Whole genome GraphTyper joint call pVCF
/Bulk/Whole genome sequences/Whole genome GraphTyper joint call pVCF/
.vcf.gz, .vcf.gz.tbi,
qc_metrics_graphtyper_v2.7.1_qc.tab.gz,
qc_metrics_graphtyper_v2.7.1_qc.tab.gz.tbi,
qc_metrics_graphtyper_v2.7.1_README.pdf
Whole genome GraphTyper SV data
/Bulk/Whole genome sequences/Whole genome GraphTyper SV data/
.vcf.gz, .vcf.gz.tbi
Whole genome variant call files (VCFs)
/Bulk/Whole genome sequences/Whole genome variant call files (VCFs)/
.g.vcf.gz
Whole genome variant call files (VCFs)
/Bulk/Whole genome sequences/Whole genome variant call files (VCFs)/
.g.vcf.gz.tbi
Whole genome variant call files (VCFs)
/Bulk/Whole genome sequences/Whole genome variant call files (VCFs) (reserved)/
.g.vcf.gz
Whole genome variant call files (VCFs)
/Bulk/Whole genome sequences/Whole genome variant call files (VCFs) (reserved)/
.g.vcf.gz.tbi
BQSR - GATK BaseRecalibrator
/Bulk/Whole genome sequences/BQSR - GATK BaseRecalibrator (reserved)/
.recal_table
Sample Contamination (ReadHaps)
/Bulk/Whole genome sequences/Sample Contamination (ReadHaps) (reserved)/
.contamination
Genotype Concordance - Contingency Metrics
/Bulk/Whole genome sequences/Genotype Concordance - Contingency Metrics (reserved)/
.genotype_concordance_contingency_metrics
Genotype Concordance - Detail Metrics
/Bulk/Whole genome sequences/Genotype Concordance - Detail Metrics (reserved)/
.genotype_concordance_detail_metrics
Genotype Concordance - Summary Metrics (Picard)
/Bulk/Whole genome sequences/Genotype Concordance - Summary Metrics (Picard) (reserved)/
.genotype_concordance_summary_metrics
Genotype Concordance
/Bulk/Whole genome sequences/Genotype Concordance (reserved)/
.nrd.stats
Concatenated QC Metrics
/Bulk/Whole genome sequences/
Concatenated QC Metrics (reserved)/
.qaqc_metrics
Sample Contamination (verifyBamID) - depthSM
/Bulk/Whole genome sequences/Sample Contamination (verifyBamID) - depthSM (reserved)/
.verifyBamID.depthSM
Sample Contamination (verifyBamID) - selfSM
/Bulk/Whole genome sequences/Sample Contamination (verifyBamID) - selfSM (reserved)/
.verifyBamID.selfSM
Manta-called scored structural variant and indel candidates (Vanguard)
/Bulk/Whole genome sequences/Manta-called scored structural variant and indel candidates (Vanguard)/
.diploidSV.vcf.gz.tbi, .diploidSV.vcf.gz
Manta-called unscored structural variant and indel candidates (Vanguard)
/Bulk/Whole genome sequences/Manta-called unscored structural variant and indel candidates (Vanguard)/
.candidateSV.vcf.gz.tbi, .candidateSV.vcf.gz
DRAGEN population level WGS variants, pVCF format [500k release]
/Bulk/DRAGEN WGS/DRAGEN population level WGS variants, pVCF format [500k release]/chr{1-22,X,Y,M}/
vcf.gz, vcf.gz.tbi
MNI Native Transform
/Bulk/Brain MRI/Native atlases/
zip
Native aparc a2009s dMRI
/Bulk/Brain MRI/Native atlases (Diffusion)/
zip
Native aparc dMRI
/Bulk/Brain MRI/Native atlases (Diffusion)/
zip
Native Glasser dMRI
/Bulk/Brain MRI/Native atlases (Diffusion)/
zip
Native Schaefer7n200p dMRI
/Bulk/Brain MRI/Native atlases (Diffusion)/
zip
Native Schaefer7n500p dMRI
/Bulk/Brain MRI/Native atlases (Diffusion)/
zip
Native Tian Subcortex S1 3T dMRI
/Bulk/Brain MRI/Native atlases (Diffusion)/
zip
Native Tian Subcortex S4 3T dMRI
/Bulk/Brain MRI/Native atlases (Diffusion)/
zip
Native Schaefer7n1000p dMRI
/Bulk/Brain MRI/Native atlases (Diffusion)/
zip
Native aparc a2009s SF
/Bulk/Brain MRI/Native atlases (Structural and functional)/
zip
Native aparc SF
/Bulk/Brain MRI/Native atlases (Structural and functional)/
zip
Native Glasser SF
/Bulk/Brain MRI/Native atlases (Structural and functional)/
zip
Native Schaefer7n100p to 1000p SF
/Bulk/Brain MRI/Native atlases (Structural and functional)/
zip
Native Tian Subcortex S1 to S4 3T
/Bulk/Brain MRI/Native atlases (Structural and functional)/
zip
fMRI timeseries aparc a2009s
/Bulk/Brain MRI/Functional time series/
zip
fMRI timeseries aparc
/Bulk/Brain MRI/Functional time series/
zip
fMRI timeseries Glasser
/Bulk/Brain MRI/Functional time series/
zip
fMRI timeseries global signal
/Bulk/Brain MRI/Functional time series/
zip
fMRI timeseries Schaefer7ns 100p to 1000p
/Bulk/Brain MRI/Functional time series/
zip
fMRI timeseries Tian Subcortex S1 to S4 3T
/Bulk/Brain MRI/Functional time series/
zip
Connectome aparc a2009s and Tian Subcortex S1 3T
/Bulk/Brain MRI/Connectomes/
zip
Connectome aparc and Tian Subcortex S1 3T
/Bulk/Brain MRI/Connectomes/
zip
Connectome Glasser and Tian Subcortex S1 3T
/Bulk/Brain MRI/Connectomes/
zip
Connectome Glasser and Tian Subcortex S4 3T
/Bulk/Brain MRI/Connectomes/
zip
Connectome Schaefer7n1000p and Tian Subcortex S4 3T
/Bulk/Brain MRI/Connectomes/
zip
Connectome Schaefer7n200p and Tian Subcortex S1 3T
/Bulk/Brain MRI/Connectomes/
zip
Connectome Schaefer7n500p and Tian Subcortex S4 3T
/Bulk/Brain MRI/Connectomes/
zip
Tractography endpoints coordinates
/Bulk/Brain MRI/Connectomes/
zip
Tractography quality metrics
/Bulk/Brain MRI/Connectomes/
zip
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